（#co-first author; *Corresponding author）
家禽的驯化历史和表型进化
1. Peng MS*, Han JL, Zhang YP. (2022) Missing puzzle piece for the origins of domestic chickens. Proceedings of the National Academy of Sciences of the United States of America 119:e2210996119.
2. Shen QK#, Peng MS#, Adeola AC#, Kui L#, Duan S, Miao YW, Eltayeb NM, Lichoti JK, Otecko NO, Strillacci MG, Gorla E, Bagnato A, Charles OS, Sanke OJ, Dawuda PM, Okeyoyin AO, Musina J, Njoroge P, Agwanda B, Kusza S, Nanaei HA, Pedar R, Xu MM, Du Y, Nneji LM, Murphy RW, Wang MS, Esmailizadeh A*, Dong Y*, Ommeh SC*, Zhang YP*. (2021) Genomic analyses unveil helmeted guinea fowl (Numida meleagris) domestication in West Africa. Genome Biology and Evolution 13:evab090.
3. Wang MS#, Thakur M#, Peng MS#, Jiang Y#, Frantz LAF#, Li M#, Zhang JJ, Wang S, Peters J, Otecko NO, Suwannapoom C, Guo X, Zheng ZQ, Esmailizadeh A, Hirimuthugoda NY, Ashari H, Suladari S, Zein MSA, Kusza S, Sohrabi S, Kharrati-Koopaee H, Shen QK, Zeng L, Yang MM, Wu YJ, Yang XY, Lu XM, Jia XZ, Nie QH, Lamont SJ, Lasagna E, Ceccobelli S, Gunwardana HGTN, Senasige TM, Feng SH, Si JF, Zhang H, Jin JQ, Li ML, Liu YH, Chen HM, Ma C, Dai SS, Bhuiyan AKFH, Khan MS, Silva GLLP, Le TT, Mwai OA, Ibrahim MNM, Supple M, Shapiro B, Hanotte O, Zhang G, Larson G, Han JL*, Wu DD*, Zhang YP*. (2020) 863 genomes reveal the origin and domestication of chicken. Cell Research 30:693-701.（封面文章，Science专题报道）
4. Wang MS#, Otecko NO#, Wang S#, Wu DD#, Yang MM, Xu YL, Murphy RW, Peng MS*, Zhang YP*. (2017) An evolutionary genomic perspective on the breeding of dwarf chickens. Molecular Biology and Evolution 34:3081-3088.
泛第三极地区人群历史重建
1. Peng MS#, Liu YH#, Shen QK#, Zhang XH#, Dong J#, Li JX, Zhao H, Zhang H, Zhang X, He Y, Shi H, Cui C, Ouzhuluobu, Wu TY, Liu SM, Gonggalanzi, Baimakangzhuo, Bai C, Duojizhuoma, Liu T, Dai SS, Murphy RW, Qi XB*, Dong G*, Su B*, Zhang YP*. (2023) Genetic and cultural adaptations underlie the establishment of dairy pastoralism in the Tibetan Plateau. BMC Biology (In Press).
2. Dai SS#, Sulaiman X#, Isakova J#, Xu WF#, Abdulloevich NT, Afanasevna ME, Ibrohimovich KB, Chen X, Yang WK, Wang MS, Shen QK, Yang XY, Yao YG, Aldashev AA, Saidov A, Chen W, Cheng LF*, Peng MS*, Zhang YP*. (2022) The genetic echo of the Tarim mummies in modern Central Asians. Molecular Biology and Evolution 39:msac179.
3. Yang XY#, Rakha A#, Chen W, Hou J, Qi XB, Shen QK, Dai SS, Sulaiman X, Abdulloevich NT, Afanasevna ME, Ibrohimovich KB, Chen X, Yang WK, Adnan A, Zhao RH, Yao YG, Su B, Peng MS*, Zhang YP*. (2021) Tracing the genetic legacy of the Tibetan Empire in the Balti. Molecular Biology and Evolution 38:1529-1536.
遗传资源评估、挖掘和工具开发
1. Cai ZF#, Hu JY#, Yin TT#, Wang D, Shen QK, Ma C, Ou DQ, Xu MM, Shi X, Li QL, Wu RN, Ajuma L, Adeola AC, Zhang YP*, Peng MS*. (2023) Long amplicon HiFi sequencing for mitochondrial DNA genomes. Molecular Ecology Resources 23:1014-1022.（封面文章）
2. Adeola AC#, Luka PD#, Jiang XX#, Cai ZF#, Oluwole OO, Shi X, Oladele BM, Olorungbounmi TO, Boladuro B, Omotosho O, Okoro VMO, Dawuda PM, Olaogun SC, Sanke OJ, Xie HB, Bishop RP, Han J, Li J*, Zhang YP*, Peng MS*. (2023) Target capture sequencing for the first Nigerian genotype I ASFV genome. Microbial Genomics 9:mgen001069.
3. Xie HB#, Yan C#, Adeola AC#, Wang K#, Huang CP#, Xu MM, Qiu Q, Yin X, Fan CY, Ma YF, Yin TT, Gao Y, Deng JK, Okeyoyin AO, Oluwole OO, Omotosho O, Okoro VMO, Omitogun OG, Dawuda PM, Olaogun SC, Nneji LM, Ayoola AO, Sanke OJ, Luka PD, Okoth E, Lekolool I, Mijele D, Bishop RP, Han J*, Wang W*, Peng MS*, Zhang YP*. (2022) African Suid genomes provide insights into the local adaptation to diverse African environments. Molecular Biology and Evolution 39:msac256.
4. Xu MM#, Gu LH#, Lv WY#, Duan SC#, Li LW, Du Y, Lu LZ, Zeng T, Hou ZC, Ma ZS, Chen W, Adeola AC, Han JL, Xu TS*, Dong Y*, Zhang YP*, Peng MS*. (2022) Chromosome-level genome assembly of the Muscovy duck provides insight into fatty liver susceptibility. Genomics 114:110518.
